正文
获取原文件references/monarch.md
Base URL
https://api.monarchinitiative.org/v3/api
Auth
No API key required.
Key Endpoints
| Endpoint | Description |
|---|---|
/search?q={query} |
Text search across all entities |
/autocomplete?q={prefix} |
Autocomplete entity names |
/entity/{id} |
Entity details (gene, disease, phenotype) |
/association?entity={id} |
Associations for an entity |
/association?entity={id}&category={cat} |
Filtered associations |
Entity ID Prefixes
MONDO:— diseases (e.g.MONDO:0007947)HP:— phenotypes (e.g.HP:0001250)HGNC:— genes (e.g.HGNC:3603)NCBIGene:— genes (e.g.NCBIGene:7157)
Association Categories
biolink:GeneToPhenotypicFeatureAssociation, biolink:DiseaseToPhenotypicFeatureAssociation, biolink:GeneToDiseaseAssociation
Example Calls
# Search for Marfan syndrome
https://api.monarchinitiative.org/v3/api/search?q=Marfan+syndrome&limit=5
# Entity details for a disease
https://api.monarchinitiative.org/v3/api/entity/MONDO:0007947
# Gene-to-phenotype for FBN1
https://api.monarchinitiative.org/v3/api/association?entity=HGNC%3A3603&category=biolink:GeneToPhenotypicFeatureAssociation&limit=10
Response Format
Paginate search/associations with limit and zero-based offset. JSON. Search: items[] with id, name, category. Associations: items[] with subject, predicate, object, publications.
Rate Limits
No published limits. Be reasonable.