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医学公开数据库查询与登记

使用有明确接口的公开数据库查询方法保存请求、筛选、分页与来源,可用于医学文献、临床试验及药物资料检索。

开源精选医疗业务86 个文件50,135 Stars浏览次数 0K-Dense-AI/scientific-agent-skills MIT版本 a1043ef
开始使用

下载前阅读 SKILL.md 中的使用条件,并确认所用工具支持对应能力。

输入资料
指定数据库和查询问题 实际接口、筛选条件及使用范围 阅读本节完整说明
交付内容
可复查的查询资料 请求、分页与来源记录 阅读本节完整说明
  1. 获取完整包,保留配套文件的目录结构。
  2. 按照原文准备所需工具、依赖与输入资料。
  3. 阅读对应使用步骤与输入输出说明,在自己的环境中验证结果。

使用提示摘自原文,配套文件保留来源版本;实际运行条件以各包说明为准。

正文

获取原文件

references/cosmic.md

Use the official COSMIC site to search genes, mutations, tissues and Cancer Gene Census records. Programmatic bulk access is through the licensed download service. A COSMIC account and acceptance of the applicable data licence are required; commercial access has separate licensing terms.

Workflow:

  1. Sign in through COSMIC and select the dataset, release and genome assembly.
  2. Use the download instructions supplied for that release/account. If the service supplies a temporary signed URL, download it promptly and keep it out of logs and published artifacts.
  3. Record the release, file name, checksum, assembly and selected columns.
  4. Filter locally by gene, tissue or variant; preserve sample identifiers and distinguish mutation counts from numbers of tested samples.

No current public documentation was found supporting a generic /cosmic/api/v1 mutation-search API or a JWT /auth/login workflow. Those recipes have been removed. Authenticated downloads were not executed during this review; consult the signed-in official instructions for exact routes.

COSMIC catalogue inclusion is evidence of observation in a cancer sample, not proof of driver status, pathogenicity or response to a drug.

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