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医学公开数据库查询与登记

使用有明确接口的公开数据库查询方法保存请求、筛选、分页与来源,可用于医学文献、临床试验及药物资料检索。

开源精选医疗业务86 个文件50,135 Stars浏览次数 0K-Dense-AI/scientific-agent-skills MIT版本 a1043ef
开始使用

下载前阅读 SKILL.md 中的使用条件,并确认所用工具支持对应能力。

输入资料
指定数据库和查询问题 实际接口、筛选条件及使用范围 阅读本节完整说明
交付内容
可复查的查询资料 请求、分页与来源记录 阅读本节完整说明
  1. 获取完整包,保留配套文件的目录结构。
  2. 按照原文准备所需工具、依赖与输入资料。
  3. 阅读对应使用步骤与输入输出说明,在自己的环境中验证结果。

使用提示摘自原文,配套文件保留来源版本;实际运行条件以各包说明为准。

正文

获取原文件

references/addgene.md

Access and authentication

Base: https://api.developers.addgene.org. Access requires approval and a license for each requested scope; a normal Addgene account does not grant API access. Use Authorization: Token <ADDGENE_API_KEY>.

Read endpoints

GET path Purpose
/catalog/plasmid/ Search/list plasmids
/catalog/plasmid/{id}/ One plasmid
/catalog/plasmid-with-sequences/{id}/ One plasmid with sequences; requires catalog:retrieve-with-sequences
/catalog/viral-prep/ List viral preparations
/catalog/viral-prep/{id}/ One viral preparation

Ordinary catalog reads require catalog:retrieve or the sequence-enabled scope. Use q for free text; documented field filters include name, backbone, genes, article_pmid, and species. List responses contain count, next, previous, and results. Follow next; page and page_size control pagination. Use sort_by=id for stable pagination; relevance sorting requires q.

Illustrative authenticated request (not executed):

curl --fail-with-body --get 'https://api.developers.addgene.org/catalog/plasmid/' \
  -H "Authorization: Token ${ADDGENE_API_KEY}" \
  --data-urlencode 'q=GFP' --data-urlencode 'sort_by=id' \
  --data-urlencode 'page_size=5'

Plasmid records include cloning, insert, sequence, and article data according to scope; nullable fields and empty arrays are legitimate. Use licensed daily JSON bulk downloads for large retrievals. The old /api/plasmids, /depositors, and /articles routes are not the documented developer API.

Reviewed 2026-09-30: OpenAPI schema and access requirements.

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