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医疗报告结构与来源检查

整理病例、诊断、试验和研究报告的文档结构,使用本地检查工具核对来源事实与报告字段,结果供专业人员审阅。

开源精选医疗业务39 个文件50,135 Stars浏览次数 2K-Dense-AI/scientific-agent-skills MIT版本 a1043ef
开始使用

适用环境:Requires Python 3.11+ for optional dependency-free local scripts. No credentials or network needed for data processing; network access is needed only to review current public guidance.

输入资料
获准使用且符合原文范围的资料 经过核查的来源事实与报告类型 阅读本节完整说明
交付内容
结构化报告草稿 来源与文档检查记录 阅读本节完整说明
  1. 获取完整包,保留配套文件的目录结构。
  2. 按照原文准备所需工具、依赖与输入资料。
  3. 阅读对应使用步骤与输入输出说明,在自己的环境中验证结果。

使用提示摘自原文,配套文件保留来源版本;实际运行条件以各包说明为准。

正文

获取原文件

references/report_type_routing.md

Select one route before opening a template. Do not merge routes merely because artifacts share clinical data.

Decision sequence

  1. Is the artifact a patient-care record? Stop. This skill does not create SOAP notes, H&Ps, consultation notes, discharge summaries, prescriptions, orders, triage instructions, or signed diagnostic reports.
  2. Is it a single clinical case intended for publication? Use CARE.
  3. Is it a diagnostic-report scaffold controlled by a clinical service? Use ACR, the current specimen-specific CAP protocol, or CLIA as applicable.
  4. Is it a randomized-trial protocol? Use SPIRIT 2025 and applicable extensions.
  5. Is it a randomized-trial results manuscript? Use CONSORT 2025 and applicable extensions.
  6. Is it an integrated report of one clinical study for regulatory review? Use ICH E3 plus E3 Q&A, with ICH E6(R3) and regional requirements as applicable.
  7. Is it individual pre-approval safety information? Route to ICH E2A, E2B(R3), protocol/sponsor procedures, and regional requirements. Do not automate the reportability decision.
  8. Is it individual post-approval safety information? Route to ICH E2D(R1), E2B(R3), marketing-authorisation-holder procedures, and regional requirements. Do not automate.
  9. Is it an aggregate safety table? Use the protocol/SAP, ICH E3, CONSORT Harms when applicable, and the relevant regional aggregate-analysis guidance.
  10. Is it an aggregate research summary? Use the reporting guideline for the actual design and the verified protocol/SAP. Do not imply clinical applicability.

Route matrix

Artifact Base source Add-ons Do not substitute
Case report CARE 2013 CARE 2017 explanation; target journal CONSORT, CSR, or diagnostic-report rules
Radiology scaffold ACR 2025 communication parameter Current modality/program standard and local policy A generic impression generator
Cancer pathology scaffold Current CAP protocol for exact organ/specimen Current biomarker protocol and local policy A static generic TNM checklist
Laboratory scaffold 42 CFR 493.1291 for applicable US nonwaived testing Method, specialty, state, accreditor, and laboratory policy Hardcoded reference or critical ranges
Trial protocol SPIRIT 2025 Current design/data/intervention extensions CONSORT results checklist
Randomized results CONSORT 2025 Current design/data/intervention extensions; CONSORT Harms SPIRIT protocol checklist
CSR ICH E3 and E3 Q&A E6(R3), protocol, SAP, regional submission rules CONSORT alone
Pre-approval ICSR ICH E2A and E2B(R3) Regional law/guidance and sponsor procedure Aggregate formatter
Post-approval ICSR ICH E2D(R1) and E2B(R3) Regional law/guidance and MAH procedure Pre-approval timing rules
Periodic aggregate safety ICH E2C(R2), where applicable Regional periodic-report rules E2B message schema

CONSORT/SPIRIT extension selection

The base statements address standard randomized trials. Check the live official extension catalogue for:

  • design: adaptive, cluster, cluster-crossover, crossover, dose-finding, factorial, multi-arm, non-inferiority/equivalence, N-of-1, pilot/feasibility, pragmatic, stepped-wedge, routine-data, or within-person;
  • data: abstracts, harms, outcomes, patient-reported outcomes, surrogate outcomes, equity, and pathology;
  • intervention/population: non-pharmacological, AI, social/psychological, children/adolescents, or other specialty extensions.

The catalogue now distinguishes SPIRIT-C/CONSORT-C children-and-adolescents extensions based on the 2025 statements from extensions based on CONSORT 2010 or SPIRIT 2013. Check each extension’s actual base rather than assuming the old item numbering still matches. Use the current extension with the 2025 base statement, document any conflict, and have a qualified methodologist resolve it. Do not silently renumber or reinterpret extension items.

Jurisdiction and role gate

ICH Step 4 adoption does not itself prove implementation in a jurisdiction. FDA guidance is generally nonbinding but regulations are legally operative within scope. Institutional policy, protocol, contracts, ethics determinations, and sponsor procedures may add or change duties.

Record the jurisdiction, regulated-product category, responsible role, source version/date, and reviewer before drafting. If any is unknown, mark the route BLOCKED_UNRESOLVED.

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